dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003858_56|CGC1
Gene ID: MGYG000003858_01477
Location and strand information: 5617 - 6195 (+)
Family: 3.A.1.25.5
Protein type: TC
Protein description: Biotin transporter BioY

Gene clsuter ID: MGYG000003858_56|CGC1
Gene ID: MGYG000003858_01478
Location and strand information: 6221 - 6559 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003858_56|CGC1
Gene ID: MGYG000003858_01479
Location and strand information: 6691 - 8166 (+)
Family: GH43_12|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 4.9648
Protein molecular weight: 55550.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003858_56|CGC1
Gene ID: MGYG000003858_01480
Location and strand information: 8180 - 9451 (+)
Family: GH27|CBM51
Protein type: CAZyme
Protein description: Alpha-galactosidase A
Protein isoelectric point: 4.8485
Protein molecular weight: 48380.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003858_56|CGC1
Gene ID: MGYG000003858_01481
Location and strand information: 9540 - 10883 (+)
Family: GH43_35|GH43
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.5543
Protein molecular weight: 50426.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003858_56|CGC1
Gene ID: MGYG000003858_01482
Location and strand information: 10900 - 12069 (+)
Family: GH5_4
Protein type: CAZyme
Protein description: Endoglucanase A
Protein isoelectric point: 4.7476
Protein molecular weight: 44600.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003858_56|CGC1
Gene ID: MGYG000003858_01483
Location and strand information: 12175 - 12969 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003858_56|CGC1
Gene ID: MGYG000003858_01484
Location and strand information: 13008 - 14072 (-)
Family: 8.A.59.4.2
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003858_01477	Biotin transporter BioY	TC	5617	6195	+	3.A.1.25.5
MGYG000003858_01478	hypothetical protein	null	6221	6559	+	DUF1284
MGYG000003858_01479	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	6691	8166	+	GH43_12\| GH43
MGYG000003858_01480	Alpha-galactosidase A	CAZyme	8180	9451	+	GH27\| CBM51
MGYG000003858_01481	Xylosidase/arabinosidase	CAZyme	9540	10883	+	GH43_35\| GH43
MGYG000003858_01482	Endoglucanase A	CAZyme	10900	12069	+	GH5_4
MGYG000003858_01483	HTH-type transcriptional activator RhaR	TF	12175	12969	+	HTH_AraC+HTH_AraC
MGYG000003858_01484	hypothetical protein	TC	13008	14072	-	8.A.59.4.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature